I've been using Liquid Story Binder to make "note cards". Each "card" can be used to track my scenes, sentences, sequencing, and the elements that each scene should have. LSB also has some nifty tools that make the process more fun.
These actors are Colleen Dengel, XiXi Yang, and Dyllan Christopher, who I think look like Rachel, Lisa, and Nathan. Just something to make note carding more interesting.
The pictures represent the point of veiw character. If you can read these (I know it's tiny guys :( I'm sorry.), I have the scene title, the old sentence (if it's an old scene), what I've changed (if it's a new scene), the protag, antag, conflict, twist, and setting, and then the new sentence.
The process is actually fun and seeing a well-put-together sentence gives me chills :) It's exciting to see this come together.